Publications

2014                    PuebloanLizard

Hutchins ED, Markov GJ, Eckalbar WL, George RM, King JM, Siniard AL, Corneveaux JJ, Fisher RE, Ammar MK, Allen AN, Rawls JA, Huentelman MJ, Wilson-Rawls J, Kusumi K. Transcriptmoic analysis of lizard tail regeneration reveals activation of conserved vertebrate developmental and repair mechanisms. PLOS ONE. 2014 Aug 20. doi: 10.1371/journal.pone.0105004.

2013
Kusumi K, May CM, Eckalbar WL. A large-scale view of the evolution of amniote development: insights from somitogenesis in reptiles. Curr Opin Genet Dev. 2013 Mar 14. doi:pii: S0959-437X(13)00029-4. 10.1016/j.gde.2013.02.011.

Eckalbar WL, Hutchins ED, Markov GJ, Allen AN, Corneveaux JJ, Lindblad-Toh K, Di Palma F, Alföldi J, Huentelman MJ, Kusumi K. Genome reannotation of the lizard Anolis carolinensis based on 14 adult and embryonic deep transcriptomes. BMC Genomics. 2013 Jan 23;14:49. doi: 10.1186/1471-2164-14-49.

2012
Kusumi K, Fisher RE. Studying mechanisms of regeneration in amphibian and reptilian vertebrate models. Anat Rec (Hoboken). 2012 Oct;295(10):1529-31. doi: 10.1002/ar.22541

Fisher RE, Geiger LA, Stroik LK, Hutchins ED, George RM, Denardo DF, Kusumi K, Rawls JA, Wilson-Rawls J. A histological comparison of the original and regenerated tail in the green anole, Anolis carolinensis. Anat Rec (Hoboken). 2012 Oct;295(10):1609-19. doi: 10.1002/ar.22537

Ritzman TB, Stroik LK, Julik E, Hutchins ED, Lasku E, Denardo DF, Wilson-Rawls J, Rawls JA, Kusumi K, Fisher RE. The gross anatomy of the original and regenerated tail in the green anole (Anolis carolinensis). Anat Rec (Hoboken). 2012 Oct;295(10):1596-608. doi: 10.1002/ar.22524

Sparrow DB, Chapman G, Smith AJ, Mattar MZ, Major JA, O’Reilly VC, Saga Y, Zackai EH, Dormans JP, Alman BA, McGregor L, Kageyama R, Kusumi K, Dunwoodie SL. A mechanism for gene-environment interaction in the etiology of congenital scoliosis. Cell. 2012 Apr 13;149(2):295-306. doi: 10.1016/j.cell.2012.02.054

 Eckalbar WL, Lasku E, Infante CR, Elsey RM, Markov GJ, Allen AN, Corneveaux JJ, Losos JB, DeNardo DF, Huentelman MJ, Wilson-Rawls J, Rawls A, Kusumi K. Somitogenesis in the anole lizard and alligator reveals evolutionary convergence and divergence in the amniote segmentation clock. Dev Biol. 2012 Mar 1;363(1):308-19. doi: 10.1016/j.ydbio.2011.11.021.

Fisher RE, Smith HF, Kusumi K, Tassone EE, Rawls A, Wilson-Rawls J. Mutations in the Notch pathway alter the patterning of multifidus. Anat Rec (Hoboken). 2012 Jan;295(1):32-9. doi: 10.1002/ar.21488.

2011
Kusumi K, Kulathinal RJ, Abzhanov A, Boissinot S, Crawford NG, Faircloth BC, Glenn TC, Janes DE, Losos JB, Menke DB, Poe S, Sanger TJ, Schneider CJ, Stapley J, Wade J, Wilson-Rawls J. Developing a community-based genetic nomenclature for anole lizards. BMC Genomics. 2011 Nov 11;12:554. doi: 10.1186/1471-2164-12-554.

2000-2010
Sewell W, Sparrow D, Gonzalez DM, Smith A, Eckalbar W, Gibson J, Dunwoodie SL, Kusumi K. Cyclical expression of the Notch/Wnt regulator Nrarp requires Dll3 function in somitogenesis. Dev Biol. 2009;329(2):400-9. doi: 10.1016/j.ydbio.2009.02.023.

Ryan MJ, Bales C, Nelson A, Gonzalez DM, Underkoffler L, Segalov M, Wilson-Rawls J, Cole SE, Russo P, Spinner NB, Kusumi K, Loomes KM. Biliary duct proliferation in Jag1/Fringe heterozygous mice identifies candidate modifiers of the Alagille syndrome hepatic phenotype. Hepatology. 2008;48(6):1989-97. doi: 10.1002/hep.22538.

Loomes KM, Stevens SA, O’Brien ML, Gonzalez DM, Ryan MJ, Segalov M, Dormans NJ, Mimoto MS, Gibson JD, Sewell W, Schaffer AA, Nah HD, Rappaport EF, Pratt SC, Dunwoodie SL, Kusumi K. Dll3 and Notch1 genetic interactions model axial segmental and craniofacial malformations of human birth defects. Dev Dyn. 2007;236(10):2943-51.

Turnpenny PD, Alman B, Cornier AS, Giampietro PF, Offiah A, Tassy O, Kusumi KDunwoodie SL. Abnormal vertebral segmentation and the notch signaling pathway in man, Dev Dyn. 2007;236:1456-1474.

William DA, Saitta B, Gibson JD, Traas J, Markov V, Gonzalez DM, Sewell W, Anderson DM, Pratt SC, Rappaport E, Kusumi K. Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model.Dev Biol. 2007 May 1;305(1):172-186.

Sparrow DB, Chapman G, Wouters MA, Whittock NV, Ellard S, Turnpenny PD, Kusumi K, Sillence D, Dunwoodie SL. Mutation of the LUNATIC FRINGE gene in humans causes spondylocostal dysostosis with a severe vertebral phenotype. Am J Hum Genet. 2006 Jan;78(1):28-37.

Maisenbacher MK, Han JS, O’Brien ML, Tracy MR, Erol B, Schaffer AA, Dormans JP, Zackai EH, Kusumi K. Molecular analysis of congenital scoliosis: a candidate gene approach. Hum Genet. 2005 Apr;116(5):416-419

Erol B, Tracy MR, Dormans JP, Zackai EH, Maisenbacher MK, O´Brien ML, Turnpenny PD, Kusumi K. Congenital Scoliosis and Vertebral Malformations: Characterization of Segmental Defects for Genetic Analysis. J Pediatr Orthop. 2004 Nov-Dec;24(6):674-682.

Bulman MP*, Kusumi K* (*contributed equally), Frayling TM, McKeown C, Garrett C, Lander ES, Krumlauf R, Hattersley AT, Ellard S, Turnpenny PD. Mutations in the human delta homologue, DLL3, cause axial skeletal defects in spondylocostal dysostosis. Nat Genet. 2000 Apr;24(4):438-41.